Hemat NGS Assay for Leukemia
lymphoid

Overview


Blood cancer or hematologic cancer is one of the most prevalent forms of cancer worldwide, associated with a significant mortality rate affecting the production and function of blood cells, weakening immunity and oxygen transport. Each year, these cancers make up approximately 10% of all new cancer diagnoses and affect approximately 1.2 million people globally. Leukemia is a heterogeneous group of blood cancers affecting the bone marrow and blood, classified by lineage (lymphoid or myeloid) and progression rate (acute or chronic). Accurate genetic profiling is critical for diagnosis, prognosis, and therapy selection.

Genes2Me Leukemia NGS Panel offers comprehensive coverage of clinically relevant genes associated with major leukemia types:

  • Acute Lymphoblastic Leukemia (ALL): Common in children, linked to lymphoid lineage mutations.
  • Chronic Lymphocytic Leukemia (CLL): Predominantly in older adults, characterized by B-cell proliferation.
  • Acute Myeloid Leukemia (AML): The most frequent acute adult leukemia, driven by mutations in myeloid precursors.
  • Chronic Myeloid Leukemia (CML): Accounts for 15–20% of adult cases, involving mature myeloid stem cells.

The Panel delivers comprehensive genetic analysis for hereditary susceptibility to hematologic cancers. Because these cancers are highly heterogeneous, relying on phenotype alone often falls short. Our curated panel evaluates multiple clinically relevant genes in a single test, enabling efficient detection of overlapping genetic risks. This advanced NGS-based approach enables detection of SNVs, InDels, and fusion genes across key targets and supports accurate diagnosis, predicts prognosis, and informs treatment strategies such as chemotherapy, targeted therapy, immunotherapy, and stem cell transplantation. By leveraging high-throughput sequencing, clinicians can identify actionable variants, predict disease progression, and personalize therapy for improved outcomes.

It also facilitates early symptom detection, family planning, genetic counseling, and eligibility for clinical trials empowering precision care for patients and families. G2M offers end-to-end solutions for Leukemia detection by NGS that can accelerate and streamline the detection covering a range of blood cancer causing genes with assays based on hybridization capture target enrichment. Genes and variants selected as per AMP/ASCO/NCCN guidelines. The panel encompasses a list of 208 genes along with fusion and hotspots detection that can accelerate and streamline the analysis of these malignancies by combining recommended variants with the analytical capability of G2M’s Cliseq Interpreter Platform to support clinical decision making leading to personalized treatment strategies.

Key features and highlights


lymphoid Card Image
  • Comprehensive coverage of key genes, including hard to capture regions like homologous, repetitive, GC rich and difficult-to-detect biomarkers like PAX5, FLT3-ITDs, and CEBPA for high-impact clinical insights.
  • Covers a broad range of clinically actionable markers, providing clinicians with deeper insights for more informed leukemic care.
  • Easy to use assay workflows and automation friendly.
  • Fast turnaround time and clinically significant mutations (CSM) report will be available to download.
  • High-sensitivity detection that identifies somatic mutations at allele frequencies as low as 5%, with the flexibility of local or cloud-based analysis options.
  • Provides better diagnostic, prognostic and therapy selection information for patients with leukemia malignancies.

Panel Performance

Features Performance
Coverage uniformity (0.2X) >99%
Reproducibility (%) 98
Sensitivity (%) 98.5
On Target Ratio (%) 75-85

Panel Specifications


Parameter Description
Commercial name and catalogue number: Leukemia NGS Panel
Enrichment methodology: Hybridization target capture
No. of genes covered: 208
Mutation types: SNV/ InDels/ CNV/DNA & RNA Fusions
Covered region: Whole CDS, DNA & RNA fusions, Hotspots
Target size: 653 Kb
Coverage recommendations: 1200X
Data requirement per sample: 800 Mb
Sample type: FFPE
Platform compatibility : Illumina, Thermo Fisher (Ion Torrent), MGI, Element Biosciences
Data analysis platform: G2M CliSeq Interpreter
Bioinformatics Support: Primary Analysis: FASTQ to annotated VCF
Secondary Analysis: CNVs, SNVs, InDel, Fusions
Tertiary Analysis: Clinical interpretation
Sample input: DNA:50-500 ng
RNA:20-200 ng
Workflow time: Library Prep. (∼4 hrs.) + Hyb. (∼8 hrs.)
Shelf life: 12 months (in recommended storage conditions)
Automation option: G2M EZY-Auto Prep

Process Workflow


NGS workflow

Data Analysis and Reporting


Precision Coverage Across All Leukemia Samples
Leukemia aSSAYS

Consistent Fold 80 Values Indicating Superior Coverage Uniformity:

Fold 80 values for blood samples ranged from 1.23–1.35, showing highly uniform coverage with minimal sequencing bias supporting accurate and dependable variant detection.

Consistent Mean and Median Coverage Across Key Genes
Gene-wise coverage

Reliable Coverage Metrics for Leukemic Genes:

Coverage patterns for key cancer genes (BRCA1, PTEN, MSH2, MSH6, RET) show strong consistency, with mean (solid) and median (dashed) values closely aligned. The consistent coverage demonstrates the workflow’s robustness and reliability, ensuring dependable performance for routine clinical testing across blood and diverse sample types.

Optimized Coverage Delivering Precision in Leukemia Testing
Leukemia

Marked On-Target Alignment Among Different Cancer Patient Samples:

n-target capture efficiency across cancer patient samples. All samples achieved >79% on-target alignment, reflecting the panel’s optimized probe design, high hybridization specificity, and robust sequencing performance.

Ordering Information


Commercial Name Cat No. Pack Size Platform
Hemat NGS Test Kit for Leukemia G710017-1 24 T Illumina
G710017-2 96 T Illumina
G710017-3 96 T – EZY Illumina – EZY
Hemat NGS Test Kit for Leukemia G710017-4 24 T MGI
G710017-5 96 T MGI
G710017-6 96 T – EZY MGI – EZY
Hemat NGS Test Kit for Leukemia G710017-7 24 T Aviti
G710017-8 96 T Aviti
G710017-9 96 T – EZY Aviti – EZY
Hemat NGS Test Kit for Leukemia G710017-10 24 T Thermo
G710017-11 96 T Thermo
G710017-12 96 T – EZY Thermo – EZY

Resources to get started


Download useful documents and technical information of blood cancer Hemat NGS Panel.

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